difcoccur: Differential coenriched pathways

In reggenlab/UniPath: UniPath provides robust statistical methods to represent every single cell using pathway and gene-set enrichment scores. It can be used with both single cell RNA-seq and single cell ATAC-seq profile with scalability for atlas scale data-sets. Unipath comes with several features like psuedo-temporal ordering using pathway scores and unconventional way of enumerating differences between two cell populations.

Description

Differential coenriched pathways

Usage

difcoccur(data, group)

Arguments

data	Raw p-value pathway score matrix
group	group 1 for cells of interest and rest in group 2

Value

A list containing matrix of p-values and difference among the groups

Examples

difcoccur()

reggenlab/UniPath documentation built on Nov. 26, 2020, 8:09 a.m.