API for reptalex/phylofactor
phylofactor

Global functions
BalanceContrast	Man page Source code
FTmicrobiome	Man page
GAM	Man page Source code
HGTplot	Man page Source code
OTUtoTaxa	Man page Source code
PhyCA	Man page Source code
PhyloFactor	Man page Source code
PhyloRegression	Man page Source code
TaxaSplit	Man page Source code
VAR	Man page Source code
amalgamate	Man page Source code
bins	Man page Source code
clo	Man page Source code
crossVmap	Man page Source code
extractEdges	Man page Source code
find.unsplit.Grps	Man page Source code
findInterruptions	Man page Source code
findWinner	Man page Source code
gMean	Man page Source code
getAssignedGroups	Man page Source code
getFactoredEdges	Man page Source code
getFactoredEdgesPAR	Man page Source code
getLabelledGrp	Man page Source code
getNewGroups	Man page Source code
getObjective	Man page Source code
getPhyloGroups	Man page Source code
getSignal	Man page Source code
getStats	Man page Source code
gpf	Man page Source code
ilrInv	Man page Source code
ilrvec	Man page Source code
listTaxa	Man page Source code
mAggregation	Man page Source code
matrix.to.phyloframe	Man page Source code
pf.BINprojection	Man page Source code
pf.ILRprojection	Man page Source code
pf.crossValidateMap	Man page Source code
pf.flow	Man page Source code
pf.getPhyloGroups	Man page Source code
pf.groupsTospecies	Man page Source code
pf.heatmap	Man page Source code
pf.nullsim	Man page Source code
pf.plot	Man page Source code
pf.predict	Man page Source code
pf.resume	Man page Source code
pf.summary	Man page Source code
pf.taxa	Man page Source code
pf.tidy	Man page Source code
pf.tree	Man page Source code
pglm	Man page Source code
phyca.tidy	Man page Source code
phyloFcluster	Man page Source code
phyloFrame	Man page Source code
phylobin	Man page Source code
phyloframe.to.matrix	Man page Source code
predict.phylofactor	Man page Source code
print.phylofactor	Man page Source code
print.phylofactor.summary	Man page Source code
pvDeviance	Man page Source code
simHGT	Man page Source code
summary.phylofactor	Man page Source code
taxaTree	Man page Source code
twoSampleFactor	Man page Source code
uniqueTaxa	Man page Source code
updateBinList	Man page Source code
updateTreeList	Man page Source code
whichBinSplit	Man page Source code