adaptRefQuantiles: Functions from 450-pipeline (Touleimat & Tost)
In schalkwyk/wateRmelon: Illumina DNA methylation array normalization and metrics
View source: R/adaptRefQuantiles.R
adaptRefQuantiles R Documentation
Functions from 450-pipeline (Touleimat & Tost)
Description
These functions are part of the 450K pipeline (Touleimat and Tost, Epigenomics 2012 4:325). For freestanding use of the normalization function, a wrapper is
provided, see tost
Author(s)
Nizar Touleimat, wrapper by Leonard.Schalkwyl@kcl.ac.uk
References
Touleimat N, Tost J: Complete pipeline for Infinium R Human
Methylation 450K BeadChip data processing using subset quantile
normalization for accurate DNA methylation estimation. Epigenomics
2012, 4:325-341
Pidsley R, Wong CCY, Volta M, Lunnon K, Mill J, Schalkwyk LC:
A data-driven approach to preprocessing Illumina 450K methylation
array data (submitted)
schalkwyk/wateRmelon documentation built on Aug. 13, 2024, 9:52 a.m.
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View source: R/adaptRefQuantiles.R
| adaptRefQuantiles | R Documentation |
Functions from 450-pipeline (Touleimat & Tost)
Description
These functions are part of the 450K pipeline (Touleimat and Tost, Epigenomics 2012 4:325). For freestanding use of the normalization function, a wrapper is
provided, see tost
Author(s)
Nizar Touleimat, wrapper by Leonard.Schalkwyl@kcl.ac.uk
References
Touleimat N, Tost J: Complete pipeline for Infinium R Human Methylation 450K BeadChip data processing using subset quantile normalization for accurate DNA methylation estimation. Epigenomics 2012, 4:325-341
Pidsley R, Wong CCY, Volta M, Lunnon K, Mill J, Schalkwyk LC: A data-driven approach to preprocessing Illumina 450K methylation array data (submitted)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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