adaptRefQuantiles: Functions from 450-pipeline (Touleimat & Tost)

Description Value Author(s) References

View source: R/adaptRefQuantiles.R


These functions are part of the 450K pipeline (Touleimat and Tost, Epigenomics 2012 4:325). For freestanding use of the normalization function, a wrapper is provided, see tost


see tost


Nizar Touleimat, wrapper by [email protected]


Touleimat N, Tost J: Complete pipeline for Infinium R Human Methylation 450K BeadChip data processing using subset quantile normalization for accurate DNA methylation estimation. Epigenomics 2012, 4:325-341

Pidsley R, Wong CCY, Volta M, Lunnon K, Mill J, Schalkwyk LC: A data-driven approach to preprocessing Illumina 450K methylation array data (submitted)

schalkwyk/wateRmelon documentation built on Oct. 27, 2018, 3:26 a.m.