beadc: Calculates the number of samples with bead count <3 for each...

View source: R/pfilter.R

beadcR Documentation

Calculates the number of samples with bead count <3 for each probe in matrix of bead count values

Description

Calculates the number of samples with bead count <3 for each probe in matrix of bead count values.

Usage

beadc(x)

Arguments

x

matrix of bead count values returned by the beadcount function

Value

Vector of number of samples with bead count <3 for each probe

Note

The beadc function is internal to the pfilter function

Author(s)

ruth.pidsley@kcl.ac.uk

References

[1] Pidsley R, Wong CCY, Volta M, Lunnon K, Mill J, Schalkwyk LC: A data-driven approach to preprocessing Illumina 450K methylation array data (submitted)


schalkwyk/wateRmelon documentation built on Aug. 13, 2024, 9:52 a.m.