annotate_with_biomart: Title
In smaegol/nanotail: Analysis and visualisation of Nanopolish-based polyA lengths estimations
View source: R/polya_annotate.R
annotate_with_biomart R Documentation
Title
Description
Title
Usage
annotate_with_biomart(
polya_data,
attributes_to_get = c("ensembl_transcript_id", "external_gene_name", "description",
"transcript_biotype"),
filters = "ensembl_transcript_id",
mart_to_use = NA
)
Arguments
polya_data
polya data table to annotate
attributes_to_get
what annotations should be retrieved. Default = c('external_gene_name','description','transcript_biotype')
filters
which column should be matched in the target mart
mart_to_use
mart object created with useMart or useEnsembl
Value
a tibble
smaegol/nanotail documentation built on June 29, 2024, 12:35 a.m.
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View source: R/polya_annotate.R
| annotate_with_biomart | R Documentation |
Title
Description
Title
Usage
annotate_with_biomart(
polya_data,
attributes_to_get = c("ensembl_transcript_id", "external_gene_name", "description",
"transcript_biotype"),
filters = "ensembl_transcript_id",
mart_to_use = NA
)
Arguments
polya_data |
polya data table to annotate |
attributes_to_get |
what annotations should be retrieved. Default = c('external_gene_name','description','transcript_biotype') |
filters |
which column should be matched in the target mart |
mart_to_use |
mart object created with useMart or useEnsembl |
Value
a tibble
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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