summarize_polya_per_transcript: Summarize poly(A) data per transcript
In smaegol/nanotail: Analysis and visualisation of Nanopolish-based polyA lengths estimations
summarize_polya_per_transcript R Documentation
Summarize poly(A) data per transcript
Description
Summarize poly(A) data per transcript
Usage
summarize_polya_per_transcript(
polya_data,
groupBy = NULL,
transcript_id_column = transcript,
summary_functions = list("median", "mean"),
quantiles = NA
)
Arguments
polya_data
input table with poly(A) data.
transcript_id_column
column with transcript identifier. Default to "transcript"
summary_functions
list of summary functions. Set to NA to get only counts per transcript
quantiles
vector with quantile values (optional)
summary_factors
vector of grouping columns. Set to NULL to omit grouping
Value
a tibble with summarized poly(A) length data
smaegol/nanotail documentation built on June 29, 2024, 12:35 a.m.
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| summarize_polya_per_transcript | R Documentation |
Summarize poly(A) data per transcript
Description
Summarize poly(A) data per transcript
Usage
summarize_polya_per_transcript(
polya_data,
groupBy = NULL,
transcript_id_column = transcript,
summary_functions = list("median", "mean"),
quantiles = NA
)
Arguments
polya_data |
input table with poly(A) data. |
transcript_id_column |
column with transcript identifier. Default to "transcript" |
summary_functions |
list of summary functions. Set to NA to get only counts per transcript |
quantiles |
vector with quantile values (optional) |
summary_factors |
vector of grouping columns. Set to NULL to omit grouping |
Value
a tibble with summarized poly(A) length data
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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