plot_virtual_gel: Title

In smaegol/nanotail: Analysis and visualisation of Nanopolish-based polyA lengths estimations

Title

Description

Title

Usage

plot_virtual_gel(
  input_data,
  groupingFactor,
  valuesColumn,
  density_bw = 0.6,
  kernel = "gaussian",
  shift_bands = 0,
  kernel_from = 0,
  kernel_to = NA,
  scale_by_size = T,
  scaling_vector = NA
)

Arguments

input_data	data frame (or tibble) with input values
groupingFactor	factor to group input table by
valuesColumn	column with numeric values to calculate density on
density_bw	bandwidth of density (bw argument to density function, default=1 )
kernel	kenrel to use
shift_bands	shift bands by specified value
kernel_from	from which value start density estimation
kernel_to	to which value perform density estimation
scale_by_size	should densities be scaled by sample size
scaling_vector	vector containing scaling factors

Value

list containing plot and density estimates (data.frame)

smaegol/nanotail documentation built on June 29, 2024, 12:35 a.m.