read_polya_multiple: Reads multiple nanopolish polyA predictions at once

In smaegol/nanotail: Analysis and visualisation of Nanopolish-based polyA lengths estimations

Reads multiple nanopolish polyA predictions at once

Description

This function can be used to load any number of files with polyA predictions with single invocation, allowing for metadata specification.

Usage

read_polya_multiple(samples_table, ...)

Arguments

samples_table	data.frame or tibble containing samples metadata and paths to files. Should have at least two columns: polya_path - containing path to the polya predictions file sample_name - unique name of the sample Additional columns can provide metadata which will be included in the final table
...	additional parameters to pass to read_polya_single(), like gencode=(TRUE/FALSE)

Value

a tibble containing polyA predictions for all specified samples, with metadata provided in samples_table stored as separate columns

See Also

read_polya_single

smaegol/nanotail documentation built on June 29, 2024, 12:35 a.m.