setSpiderSeqROption: Set options for functioning of the package
In ss-lab-cancerunit/SpiderSeqR: A Tool for Integration of Big Bio Data

Description Usage Arguments Value Available options Examples

Set options for global behaviour of the package functions.

1	setSpiderSeqROption(name, value)

`name`	A character with the name of a variable
`value`	Value to be assigned to the variable

Nothing. Assign the value to a variable.

file_output - Logical - If TRUE, the search functions will produce file outputs. If FALSE, no files will be created. Defaults to TRUE
output_columns - Character vector - A set of columns to be used for generating file outputs. Defaults to one of the listColumnSets().
quiet - Whether any messages should be printed in the console
testing - (for developer use) whether unit tests are being run

startSpiderSeqRDemo()
setSpiderSeqROption("file_output", FALSE)
setSpiderSeqROption("output_columns", c("run_accession", "gsm"))
setSpiderSeqROption("output_columns", listColumnSets()$Accession)