combine_overlapping_pathways: Modify a pathway list to combine overlapping pathways.
In tgrimes/dnapath2: Differential Network Analysis Using Gene Pathways
Description
Usage
Arguments
Value
View source: R/get_reactome_pathways.R
Description
Modify a pathway list to combine overlapping pathways.
Usage
1
combine_overlapping_pathways(pathway_list, overlap_limit = 0.9)
Arguments
pathway_list
A list of pathways obtained from
get_reactome_pathways.
threshold
A percentage between 0 and 1. If two pathways
overlap by more than this amount, they are combined into one pathway.
Value
A modified list with overlapping pathways combined together.
tgrimes/dnapath2 documentation built on May 21, 2020, 5:53 p.m.
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Description Usage Arguments Value
View source: R/get_reactome_pathways.R
Description
Modify a pathway list to combine overlapping pathways.
Usage
1 | combine_overlapping_pathways(pathway_list, overlap_limit = 0.9)
|
Arguments
pathway_list |
A list of pathways obtained from
|
threshold |
A percentage between 0 and 1. If two pathways overlap by more than this amount, they are combined into one pathway. |
Value
A modified list with overlapping pathways combined together.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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