run_silencer: Wrapper for silencer method
In tgrimes/dnapath2: Differential Network Analysis Using Gene Pathways
Description
Usage
Arguments
Value
Description
See Barzel and Barabasi (2013) for details.
Usage
1
run_silencer(x, method = "spearman", verbose = FALSE, ...)
Arguments
x
The n by p matrix of counts.
verbose
If true, update messages are printed.
threshold
Cutoff for significant associations. If NULL, all correlations
are returned. Otherwise, correlations of magnitude at or below this threshold are
set to zero.
Value
A p by p matrix of association scores.
tgrimes/dnapath2 documentation built on May 21, 2020, 5:53 p.m.
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Description Usage Arguments Value
Description
See Barzel and Barabasi (2013) for details.
Usage
1 | run_silencer(x, method = "spearman", verbose = FALSE, ...)
|
Arguments
x |
The n by p matrix of counts. |
verbose |
If true, update messages are printed. |
threshold |
Cutoff for significant associations. If NULL, all correlations are returned. Otherwise, correlations of magnitude at or below this threshold are set to zero. |
Value
A p by p matrix of association scores.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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