Description Usage Arguments Value
Sort function for 'dnapath_list' object.
1 2 3 |
x |
A 'dnapath_list' object. |
decreasing |
Logical. If TRUE (the default), results are sorted in decreasing order. |
by |
The variable to sort the results by. Must be one of: "mean_expr", the mean expression of each pathway across both groups; "mean_expr1" or "mean_expr2", the mean expression of each pathway in group 1 or 2, respectively; "dc_score", the differential connectivity score of the pathway; "p_value", the p-value of the dc score; "n_genes", the number of genes in each pathway; "n_dc" the number of significantly differentially conncted genes in each pathway. |
... |
Additional arguments are ignored. |
The differential network analysis results ordered by DC pathway score.
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