summarize_genes: Summarize the differential connectivity of genes over all...
In tgrimes/dnapath2: Differential Network Analysis Using Gene Pathways
Description
Usage
Arguments
Value
Description
Summarize the differential connectivity of genes over all pathways.
Usage
1
summarize_genes(results, alpha_gene = NULL)
Arguments
results
A 'dnapath_list' object.
alpha_gene
Threshold for p-values of gene DC scores. Used to determine
the number of pathways that each gene is differentially connected in. If NULL,
defaults to 0.05 or the minimum possible threshold (based on the
number of permutatiosn that were run).
Value
A tibble summarizing the differential connectivity of genes across
all pathways.
tgrimes/dnapath2 documentation built on May 21, 2020, 5:53 p.m.
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Description Usage Arguments Value
Description
Summarize the differential connectivity of genes over all pathways.
Usage
1 | summarize_genes(results, alpha_gene = NULL)
|
Arguments
results |
A 'dnapath_list' object. |
alpha_gene |
Threshold for p-values of gene DC scores. Used to determine the number of pathways that each gene is differentially connected in. If NULL, defaults to 0.05 or the minimum possible threshold (based on the number of permutatiosn that were run). |
Value
A tibble summarizing the differential connectivity of genes across all pathways.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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