extractFits.AllScores.ACD: Extract all scores from fits to biomass/abundance time series...

In wStockhausen/rCompTCMs: Package to compare TCSAM02, rsimTCSAM, and TCSAM2013 model runs

Extract all scores from fits to biomass/abundance time series by fleet among several model runs as a dataframe

Description

Function to extract all scores from biomass/abundance time series by fleet among several model runs.

Usage

extractFits.AllScores.ACD(
  objs = NULL,
  fleets = "all",
  fleet.type = c("survey", "fishery"),
  catch.type = c("index", "retained", "total"),
  data.type = c("biomass", "abundance"),
  verbose = FALSE
)

Arguments

objs	object that can be converted into a list of tcsam02.resLst objects
fleets	names of fleets to include (or "all" or NULL to include all)
fleet.type	fleet type ('fishery' or 'survey')
catch.type	catch type ('index','retained',or 'total')
data.type	'biomass' or 'abundance'
verbose	flag (T/F) to print diagnostic information

Details

Uses rTCSAM02::getMDFR.AllScores.Biomass() or rTCSAM02::getMDFR.AllScores.Abundance().

Value

dataframe in canonical format.

wStockhausen/rCompTCMs documentation built on Aug. 27, 2024, 7:15 p.m.