modelComparisons.ModelFits.ACD.Fisheries: Render a document of comparison plots for model fits to...

In wStockhausen/rCompTCMs: Package to compare TCSAM02, rsimTCSAM, and TCSAM2013 model runs

Render a document of comparison plots for model fits to aggregated fishery abundance/biomass data

Description

Function to render a document of comparison plots for model fits to aggregated fishery abundance/biomass data.

Usage

modelComparisons.ModelFits.ACD.Fisheries(
  models,
  plot1stObs = TRUE,
  output_format = c("word_document", "pdf_document"),
  output_dir = getwd(),
  rmd = system.file("rmd/modelComparisons.ModelFits.ACD.Fisheries.Rmd", package =
    "rCompTCMs"),
  docx_styles = system.file("rmd/StylesForRmdDocs.docx", package = "wtsUtilities"),
  pdf_styles = system.file("rmd/StylesForRmdPDFs.sty", package = "wtsUtilities"),
  clean = FALSE
)

Arguments

models	named list of model results (as resLst objects) to compare
plot1stObs	flag to plot observed data only from first model
output_format	"word_document" or "pdf_document"
output_dir	path to folder to use for output
rmd	Rmd file to process (defalut="rmd/modelComparisons.ModelFits.ACD.Fisheries.Rmd")
docx_styles	full path to Word (docx) style template for Word documents
pdf_styles	full path to style template for pdf documents
clean	T/F to delete intermediate files
rmd_dir	folder enclosing rmd file

Details

Resulting document title will be of the form "ModelComparisons.ModelFits.ACD.Fisheries.mmm.ext", where "ext" is the appropriate file extension and "mmm" is a dash-separated string of model names.

wStockhausen/rCompTCMs documentation built on Aug. 27, 2024, 7:15 p.m.