wolski/imsbInfer: Visualization, normalization and QC of proteomics SWATH-MS data
Version 0.2.4

Functions and objects (S3) to import, export, summarize, visualize and analyze quantification results of DIA MS proteomic experiments. This package is used to genrate QC reports, and to suggest data scaling and transformations to improve data quality and reduce batch effects. This package is part of a workflow to analyse data independent aquisition (DIA) SWATH quantificaton experiments in the R. Aebersold IMSB/ETH Zurich, comprising of OpenSWATH, pyProphet, and MSstats.

Getting started

Package details

AuthorWitold Wolski
MaintainerWitold Wolski <[email protected]>
LicenseGPL
Version0.2.4
Package repositoryView on GitHub
Installation Install the latest version of this package by entering the following in R:
install.packages("devtools")
library(devtools)
install_github("wolski/imsbInfer")
wolski/imsbInfer documentation built on May 28, 2017, 5:14 a.m.