wolski/imsbInfer
Visualization, normalization and QC of proteomics SWATH-MS data

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convert2msExperiment: converts to msExperiment (exported more for debugging...

convert2msExperiment: converts to msExperiment (exported more for debugging...
In wolski/imsbInfer: Visualization, normalization and QC of proteomics SWATH-MS data

Description Usage Arguments See Also Examples

View source: R/swathDataUtils.R

Description

converts to msExperiment (exported more for debugging purpose)

Usage

1
convert2msExperiment(data)

Arguments

data

output of convertLF2Wideformat

See Also

read2msExperiment and convertLF2Wideformat for contex

Examples

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data(feature_alignment_requant) 
data = convertLF2Wideformat(feature_alignment_requant)
lapply(data,dim)
SDat=convert2msExperiment(data)
stopifnot(rownames(SDat$pepinfo)==rownames(SDat$Intensity))
stopifnot(dim(SDat$Intensity) == dim(SDat$mz), dim(SDat$mz) == dim(SDat$score))

wolski/imsbInfer documentation built on March 27, 2021, 11:39 p.m.

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