read2msExperiment.default: read 2 feature alginer long format and generate an...
In wolski/imsbInfer: Visualization, normalization and QC of proteomics SWATH-MS data
Description
Usage
Arguments
Value
Examples
View source: R/swathDataUtils.R
Description
read 2 feature alginer long format and generate an msexperiment (takes peptide quantifications of feature aligner)
Usage
1
2
## Default S3 method:
read2msExperiment(obj, ...)
Arguments
obj
filename to an openswath feature alignment output
...
unused
Value
msexperiment
Examples
1
2
3
4
data(feature_alignment_requant)
SDat = read2msExperiment(feature_alignment_requant)
stopifnot(rownames(SDat$pepinfo)==rownames(SDat$Intensity))
## Not run: res = read2msExperiment("path/to/feature_alignment_requant.tsv")
wolski/imsbInfer documentation built on March 27, 2021, 11:39 p.m.
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Description Usage Arguments Value Examples
View source: R/swathDataUtils.R
Description
read 2 feature alginer long format and generate an msexperiment (takes peptide quantifications of feature aligner)
Usage
1 2 | ## Default S3 method:
read2msExperiment(obj, ...)
|
Arguments
obj |
filename to an openswath feature alignment output |
... |
unused |
Value
msexperiment
Examples
1 2 3 4 | data(feature_alignment_requant)
SDat = read2msExperiment(feature_alignment_requant)
stopifnot(rownames(SDat$pepinfo)==rownames(SDat$Intensity))
## Not run: res = read2msExperiment("path/to/feature_alignment_requant.tsv")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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