correctIntRTv2.msexperiment: correct intensity over RT for entire msexperiment

Description Usage Arguments Value Note Author(s) Examples

View source: R/correctIntRTv2.R

Description

correct intensity over RT for entire msexperiment

Usage

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## S3 method for class 'msexperiment'
correctIntRTv2(obj, k = 501, scale = FALSE,
  func = runrobscale, plot = FALSE, ...)

Arguments

obj

object of class msexperiment

k

smoothing with

scale

should scaling also be applied

func

function to use fore scaling: runrobscale or runTICscale

plot

plot

...

unused

Value

msexperiment object with RT normalized intensities

Note

reorders all entries in experiment according to RT, finds sample with fewest NA's if there are many picks that one with largest median as reference.

Author(s)

Witold Wolski wolski@gmail.com

Examples

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wolski/imsbInfer documentation built on March 27, 2021, 11:39 p.m.