API for wolski/imsbInfer
Visualization, normalization and QC of proteomics SWATH-MS data

Global functions
SDat Man page
aggregatePeptides Man page Source code
aggregateProteins Man page Source code
aggregatepeptide Source code
analyzeDuplicated Man page Source code
analyzeDuplicatedPeptides Man page Source code
analyzeDuplicatedProteins Man page Source code
analyzeDuplicatedProteinsTOP Man page Source code
compPeptideCorrelations Man page Source code
convert2MSstats Man page Source code
convert2msExperiment Man page Source code
convertLF2Wideformat Man page Source code
correctIntRTv1 Man page Source code
correctIntRTv1.default Man page Source code
correctIntRTv1.matrix Man page Source code
correctIntRTv1.msexperiment Man page Source code
correctIntRTv2 Man page Source code
correctIntRTv2.default Man page Source code
correctIntRTv2.msexperiment Man page Source code
dim.msexperiment Man page Source code
dimnames.msexperiment Man page Source code
feature_alignment_requant Man page
filterByScore Man page Source code
getListOfDuplicated Man page Source code
getListOfDuplicatedOrderedByIntensity Man page Source code
getUniqueEntries Man page Source code
imsbInfer Man page
imsbInfer-package Man page
keepRTRange Man page Source code
keepRTRange.msexperiment Man page Source code
loadTransitonsMSExperiment Man page Source code
mycolnames Man page Source code
orderByKey Man page Source code
orderByKey.msexperiment Man page Source code
orderByRT Man page Source code
orderByRT.msexperiment Man page Source code
pairsDifference Man page Source code
pairsRatio Man page Source code
plotPairCors Man page Source code
prepareDF Man page Source code
preparePepinfo Source code
randomPairs Man page Source code
read2msExperiment Man page Source code
read2msExperiment.data.frame Man page Source code
read2msExperiment.default Man page Source code
removeDecoys Man page Source code
removeDecoys.msexperiment Man page Source code
removeSample Man page Source code
removeSamples Man page Source code
reordercolumns Man page Source code
selectTopFragmentsPerPeptide Man page Source code
selectTopPeptidesPerProtein Man page Source code
setRequantToNA Man page Source code
setRequantToNA.msexperiment Man page Source code
subset Man page
subset.msexperiment Man page Source code
summaryCors Man page Source code
syncrownames Source code
transitions2wide Man page Source code
wolski/imsbInfer documentation built on May 28, 2017, 5:14 a.m.