assemble_plots: assemble plots

In zwdzwd/sesame: SEnsible Step-wise Analysis of DNA MEthylation BeadChips

assemble plots

Description

assemble plots

Usage

assemble_plots(
  betas,
  txns,
  probes,
  plt.txns,
  plt.mapLines,
  plt.cytoband,
  heat.height = NULL,
  mapLine.height = 0.2,
  show.probeNames = TRUE,
  show.samples.n = NULL,
  show.sampleNames = TRUE,
  sample.name.fontsize = 10,
  dmin = 0,
  dmax = 1
)

Arguments

betas	beta value
txns	transcripts GRanges
probes	probe GRanges
plt.txns	transcripts plot objects
plt.mapLines	map line plot objects
plt.cytoband	cytoband plot objects
heat.height	heatmap height (auto inferred based on rows)
mapLine.height	height of the map lines
show.probeNames	whether to show probe names
show.samples.n	number of samples to show (default: all)
show.sampleNames	whether to show sample names
sample.name.fontsize	sample name font size
dmin	data min
dmax	data max

Value

a grid object

zwdzwd/sesame documentation built on April 28, 2024, 12:48 p.m.