inferEthnicity: Infer Ethnicity
In zwdzwd/sesame: SEnsible Step-wise Analysis of DNA MEthylation BeadChips
inferEthnicity R Documentation
Infer Ethnicity
Description
This function uses both the built-in rsprobes as well as the type I
Color-Channel-Switching probes to infer ethnicity.
Usage
inferEthnicity(sdf, verbose = FALSE)
Arguments
sdf
a SigDF
verbose
print more messages
Details
s better be background subtracted and dyebias corrected for
best accuracy
Please note: the betas should come from SigDF *without*
channel inference.
Value
string of ethnicity
Examples
sdf <- sesameDataGet('EPIC.1.SigDF')
## inferEthnicity(sdf)
zwdzwd/sesame documentation built on Jan. 8, 2025, 4:50 a.m.
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| inferEthnicity | R Documentation |
Infer Ethnicity
Description
This function uses both the built-in rsprobes as well as the type I Color-Channel-Switching probes to infer ethnicity.
Usage
inferEthnicity(sdf, verbose = FALSE)
Arguments
sdf |
a |
verbose |
print more messages |
Details
s better be background subtracted and dyebias corrected for best accuracy
Please note: the betas should come from SigDF *without* channel inference.
Value
string of ethnicity
Examples
sdf <- sesameDataGet('EPIC.1.SigDF')
## inferEthnicity(sdf)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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