compareMouseTissueReference: Compare mouse array data with mouse tissue references

In zwdzwd/sesame: SEnsible Step-wise Analysis of DNA MEthylation BeadChips

Compare mouse array data with mouse tissue references

Description

Compare mouse array data with mouse tissue references

Usage

compareMouseTissueReference(
  betas = NULL,
  ref = NULL,
  color = "blueYellow",
  query_width = 0.3
)

Arguments

betas	matrix of betas for the target sample This argument is optional. If not given, only the reference will be shown.
ref	the reference beta values in SummarizedExperiment. This argument is optional. If not given, the reference will be downloaded from the sesameData package.
color	either blueYellow or fullJet
query_width	the width of the query beta value matrix

Value

grid object that contrast the target sample with pre-built mouse tissue reference

Examples

cat("Deprecated, see compareReference")

zwdzwd/sesame documentation built on Dec. 21, 2024, 1:20 p.m.