get_Nalls2019_coloc: Get colocalization results with Nalls2019 GWAS
In RajLabMSSM/echodata: echoverse module: Fine-mapping data access and formatting
View source: R/get_Nalls2019_coloc.R
get_Nalls2019_coloc R Documentation
Get colocalization results with Nalls2019 GWAS
Description
Get colocalization results computed by
Schilder et al. 2022
between the
Nalls2019 Parkinson's disease GWAS and all eQTL datasets in the
eQTL Catalogue.
Usage
get_Nalls2019_coloc()
Source
URL <- paste("https://github.com/RajLabMSSM/Fine_Mapping_Shiny/raw",
"master/www/data/GWAS/Nalls23andMe_2019/_genome_wide/COLOC",
"coloc.eQTL_Catalogue_ALL.csv.gz", sep="/")
tmp <- file.path(tempdir(), basename(URL))
utils::download.file(URL, tmp)
piggyback::pb_upload(file = tmp, repo = "RajLabMSSM/echodata")
Examples
coloc_res <- get_Nalls2019_coloc()
RajLabMSSM/echodata documentation built on Nov. 21, 2023, 8 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
View source: R/get_Nalls2019_coloc.R
| get_Nalls2019_coloc | R Documentation |
Get colocalization results with Nalls2019 GWAS
Description
Get colocalization results computed by Schilder et al. 2022 between the Nalls2019 Parkinson's disease GWAS and all eQTL datasets in the eQTL Catalogue.
Usage
get_Nalls2019_coloc()
Source
URL <- paste("https://github.com/RajLabMSSM/Fine_Mapping_Shiny/raw",
"master/www/data/GWAS/Nalls23andMe_2019/_genome_wide/COLOC",
"coloc.eQTL_Catalogue_ALL.csv.gz", sep="/")
tmp <- file.path(tempdir(), basename(URL))
utils::download.file(URL, tmp)
piggyback::pb_upload(file = tmp, repo = "RajLabMSSM/echodata")
Examples
coloc_res <- get_Nalls2019_coloc()
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.