enrichmentresult-class: Class '"enrichmentresult"'

In AtlasRDF: Gene Expression Atlas query and gene set enrichment package.

Description

Class to store the enrichment for a single experimental factor for a given gene set.

Usage

#enrichmentresult()

Objects from the Class

Objects can be created by calls of the form enrichmentresult().

Fields

factoruri:

Object of class "character" the URI of the experimental factor

label:

Object of class "character" human readable label of the experimental factor

p.value:

Object of class "numeric" p.value for enrichment for this factor

estimate:

Object of class "numeric" see Fishers exact test

alternative:

Object of class "character" see Fishers exact test

null.value:

Object of class "numeric" see Fishers exact test

method:

Object of class "character" Fishers exact test

enrichedgenes:

Object of class "vector" Vector of the genes enriched for this factor from the gene list

Methods

No methods defined with class "enrichmentresult" in the signature.

Author(s)

James Malone

Examples

showClass("enrichmentresult")

AtlasRDF documentation built on Nov. 17, 2017, 9:33 a.m.