getGeneUriFromName: Get URI of a gene based on the common gene name.
In AtlasRDF: Gene Expression Atlas query and gene set enrichment package.

Get the URI of an ENSEMBL gene based on a search by the common gene name.

1	getGeneUriFromName(genename, taxon, endpoint = "http://www.ebi.ac.uk/rdf/services/atlas/sparql")

`genename`	The common gene name by which to search
`taxon`	The URI of the taxon to search genes for, use function getTaxonURI to get the URI
`endpoint`	The location of the SPARQL endpoint - default value is live Atlas endpoint

list of gene URIs matching the query: note this can be more than one

James Malone, Simon Jupp

1 2	###get the gene URI identifier based on the common gene name for "SRGN" in human #getGeneUriFromName("SRGN", "obo:NCBITaxon_9606")

AtlasRDF documentation built on Nov. 17, 2017, 9:33 a.m.

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