consensusClustersTpm: Extracting consensus clusters tpm matrix from CAGEset object
In CAGEr: Analysis of CAGE (Cap Analysis of Gene Expression) sequencing data for precise mapping of transcription start sites and promoterome mining
Description
Usage
Arguments
Value
Author(s)
See Also
Examples
Description
Extracts a table with normalized CAGE tag values for consensus
clusters across all samples from a CAGEr object.
Usage
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consensusClustersTpm(object)
## S4 method for signature 'CAGEset'
consensusClustersTpm(object)
## S4 method for signature 'CAGEexp'
consensusClustersTpm(object)
Arguments
object
A CAGEr object.
Value
Returns the matrix of normalized expression values of CAGE clusters
across all samples.
Author(s)
Vanja Haberle
See Also
Examples
1
2
CAGEr documentation built on Jan. 17, 2021, 2 a.m.
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Description Usage Arguments Value Author(s) See Also Examples
Description
Extracts a table with normalized CAGE tag values for consensus
clusters across all samples from a CAGEr object.
Usage
1 2 3 4 5 6 7 | consensusClustersTpm(object)
## S4 method for signature 'CAGEset'
consensusClustersTpm(object)
## S4 method for signature 'CAGEexp'
consensusClustersTpm(object)
|
Arguments
object |
A CAGEr object. |
Value
Returns the matrix of normalized expression values of CAGE clusters
across all samples.
Author(s)
Vanja Haberle
See Also
Examples
1 2 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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