CAGEr: Analysis of CAGE (Cap Analysis of Gene Expression) sequencing data for precise mapping of transcription start sites and promoterome mining

Preprocessing of CAGE sequencing data, identification and normalization of transcription start sites and downstream analysis of transcription start sites clusters (promoters).

Package details

AuthorVanja Haberle <[email protected]>
Bioconductor views Clustering FunctionalGenomics GeneExpression Normalization Preprocessing Sequencing Transcription Visualization
MaintainerVanja Haberle <[email protected]>, Charles Plessy <[email protected]>, Damir Baranasic <[email protected]>, Sarvesh Nikumbh <[email protected]>
Package repositoryView on Bioconductor
Installation Install the latest version of this package by entering the following in R:

Try the CAGEr package in your browser

Any scripts or data that you put into this service are public.

CAGEr documentation built on Oct. 31, 2019, 6:50 a.m.