GeneExpSE: Retreives the SummarizedExperiment containing gene expression...
In CAGEr: Analysis of CAGE (Cap Analysis of Gene Expression) sequencing data for precise mapping of transcription start sites and promoterome mining
Description
Usage
Arguments
Author(s)
See Also
Examples
Description
Get or set a SummarizedExperiment using the gene expression
data in the experiment slot geneExpMatrix and the sample metadata
of the CAGEexp object.
Usage
1
2
3
4
5
6
7
Arguments
object
A CAGEexp object.
Author(s)
Charles Plessy
See Also
Other CAGEr accessor methods: CTSSclusteringMethod,
CTSScoordinates,
CTSScumulativesTagClusters,
CTSSnormalizedTpm,
CTSStagCountTable,
CTSStagCount, GeneExpDESeq2,
consensusClustersGR,
genomeName, inputFilesType,
inputFiles, librarySizes,
sampleLabels,
seqNameTotalsSE, tagClusters
Examples
1
CAGEr documentation built on Jan. 17, 2021, 2 a.m.
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Description Usage Arguments Author(s) See Also Examples
Description
Get or set a SummarizedExperiment using the gene expression
data in the experiment slot geneExpMatrix and the sample metadata
of the CAGEexp object.
Usage
1 2 3 4 5 6 7 |
Arguments
object |
A |
Author(s)
Charles Plessy
See Also
Other CAGEr accessor methods: CTSSclusteringMethod,
CTSScoordinates,
CTSScumulativesTagClusters,
CTSSnormalizedTpm,
CTSStagCountTable,
CTSStagCount, GeneExpDESeq2,
consensusClustersGR,
genomeName, inputFilesType,
inputFiles, librarySizes,
sampleLabels,
seqNameTotalsSE, tagClusters
Examples
1 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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