R/rqcGroupCycleAverageQualityCalc.R

In Rqc: Quality Control Tool for High-Throughput Sequencing Data

Defines functions rqcGroupCycleAverageQualityCalc

Documented in rqcGroupCycleAverageQualityCalc

#' @describeIn rqcGroupCycleAverageQualityPlot calculates necessary statistics
#' @export
rqcGroupCycleAverageQualityCalc <- function(rqcResultSet)
{
    df <- rqcCycleAverageQualityCalc(rqcResultSet)
    ddply(df, c("group", "cycle"), function(x) data.frame(quality = mean(x$quality)))
}

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