AtongPair: Data frame the pair of yeast gene tested in Tong et al. 2004.

In SLGI: Synthetic Lethal Genetic Interaction

Description

Data from Tong et. al. buffering experiments (2004) using synthetic genetic arrays (SGA) (Tong et al. 2001).

Usage

data(AtongPair)

Format

A data frame with 3 columns and 607881 rows.

Details

AtongPair stores the yeast gene names for each tested pairs in Tong buffering experiment. Each row represents one pair.

query

Query gene name

array

Array gene name

interact

Logical indicating the synthetic lethal status, if TRUE the genetic interaction is lethal.

Author(s)

N. LeMeur

Source

Created from the association matrix reported by Tong et al (2004) and the genes from the SGA array developed by Tong et al. (2001).

References

Systematic genetic analysis with ordered arrays of yeast deletion mutants, Tong et al, Science. Vol. 294, 2001

Global Mapping of the Yeast Genetic Interaction Network, Tong et al, Science Vol.303, 2004

Examples

data(AtongPair)
dim(AtongPair)

SLGI documentation built on Nov. 8, 2020, 11 p.m.