comemberIn: Retrieve the biological complexes.
In SLGI: Synthetic Lethal Genetic Interaction
Description
Usage
Arguments
Value
Author(s)
See Also
Examples
Description
Retrieve the biological complexes within which two proteins are comembers.
Usage
1
comemberIn(iMat,interactome)
Arguments
iMat
Comembership matrix of genes(proteins) that linked to other genes(proteins) by any
biological experiment
interactome
Adjacency matrix composed of genes (rows) and biological
complexes (columns) ScISI
Value
Dataframe of pairs of genes(proteins) and their common biological complexes.
Author(s)
N. LeMeur
See Also
Examples
1
2
3
4
5
data(Atong)
data(ScISI)
coMember<-withinComplex(Atong,ScISI)
SLpairWithinComplex <- comemberIn(coMember,ScISI)
SLGI documentation built on Nov. 8, 2020, 11 p.m.
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Description Usage Arguments Value Author(s) See Also Examples
Description
Retrieve the biological complexes within which two proteins are comembers.
Usage
1 | comemberIn(iMat,interactome)
|
Arguments
iMat |
Comembership matrix of genes(proteins) that linked to other genes(proteins) by any biological experiment |
interactome |
Adjacency matrix composed of genes (rows) and biological
complexes (columns) |
Value
Dataframe of pairs of genes(proteins) and their common biological complexes.
Author(s)
N. LeMeur
See Also
Examples
1 2 3 4 5 | data(Atong)
data(ScISI)
coMember<-withinComplex(Atong,ScISI)
SLpairWithinComplex <- comemberIn(coMember,ScISI)
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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