withinComplex: Search for protein co-membership within complexes.

In SLGI: Synthetic Lethal Genetic Interaction

Description

Search for protein co-membership within one (or more) complex(es).

Usage

withinComplex(data,interactome)

Arguments

data	Binary matrix of genes(proteins) linked to other genes(protein) by any biological experiment
interactome	Binary matrix composed of genes (rows) and biological complexes (columns) ScISI

Value

Matrix of genes(proteins) co-member of one or more biological complexes.

Author(s)

N. LeMeur

See Also

byComplex

Examples

  data(Atong)
  data(ScISIC)
  coMember <- withinComplex(Atong, ScISIC)
  table(coMember)
 

SLGI documentation built on Nov. 8, 2020, 11 p.m.