domainDist: Finds the number of gene sets for each shared domain
In SLGI: Synthetic Lethal Genetic Interaction
Description
Usage
Arguments
Details
Value
Author(s)
See Also
Examples
View source: R/getSharedDomains.R
View source: R/domainDist.R
Description
domainDist takes a list of shared domains,
and compute for each distinct domain how many gene sets share it.
Usage
1
domainDist(domainL)
Arguments
domainL
Each element of the list is a vector of functional
domains.
Details
For each domain that appears in the domain list, domainDist
counts the number of elements that have this domain.
Value
Returns a frequency table with descending order.
Author(s)
Z. Jiang
See Also
Examples
1
2
data(AtongFnDomain)
domainDist(AtongFnDomain$SharedPfam[1:20])
SLGI documentation built on Nov. 8, 2020, 11 p.m.
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Description Usage Arguments Details Value Author(s) See Also Examples
View source: R/getSharedDomains.R View source: R/domainDist.R
Description
domainDist takes a list of shared domains,
and compute for each distinct domain how many gene sets share it.
Usage
1 | domainDist(domainL)
|
Arguments
domainL |
Each element of the list is a vector of functional domains. |
Details
For each domain that appears in the domain list, domainDist
counts the number of elements that have this domain.
Value
Returns a frequency table with descending order.
Author(s)
Z. Jiang
See Also
Examples
1 2 | data(AtongFnDomain)
domainDist(AtongFnDomain$SharedPfam[1:20])
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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