plotBioMatrixSampleNames: Label Sample Names on the Top of caOmicsV bioMatrix Layout

In caOmicsV: Visualization of multi-dimentional cancer genomics data

Description

Text plot on the top of phenotype area to show sample names. bioMatrix layout and graphic device must be initialized first.

Usage

    plotBioMatrixSampleNames(sampleNames, sampleColors)

Arguments

sampleNames	character vector, sample names to be plotted
sampleColors	character vector or R color name(s) for text color(s)

Value

None

Author(s)

Henry Zhang

Examples

    initializeBioMatrixPlot(numOfGenes=1, numOfSamples=50)
    setBioMatrixPlotArea()

    sampleNames <- paste("Sample", 1:50)
    sampleColors <- c(rep("red", 30), rep("blue", 30))

    plotBioMatrixSampleData(1, areaName="phenotype", fillColor = sampleColors)
    plotBioMatrixSampleNames(sampleNames, sampleColors)

Example output

Loading required package: igraph

Attaching package: 'igraph'

The following objects are masked from 'package:stats':

    decompose, spectrum

The following object is masked from 'package:base':

    union

Loading required package: bc3net
Loading required package: c3net
Loading required package: infotheo
Loading required package: Matrix
Loading required package: lattice

caOmicsV documentation built on Nov. 8, 2020, 8:23 p.m.