Description Usage Arguments Value Author(s) Examples
View source: R/caOmicsV.bioNetCircos.R
Line plot on caOmicsv bioNetCircos layout. This method plots one track of line for every node. bionetCircos layout and graphic device must be initialized first.
1 2 |
dataValues |
numeric matrix of plot data |
outer |
non-negative numeric, the outside boundary of plot area from node center |
inner |
non-negative numeric, the inside boundary of plot area from node center |
maxValue |
numeric, the biggest value of plot data |
minValue |
numeric, the smallest value of plot data |
plotColors |
character vector or vector of R specification, colours for each sample |
None
Henry Zhang
1 2 3 4 5 6 7 | data(bionetPlotDemoData)
expr <- bionetPlotDemoData$heatmapData[[1]]
bioNet <- bc3net(expr)
initializeBioNetCircos(bioNet, totalSamples=60)
showBioNetNodesLayout()
plotBioNetLines(expr, outer=13, inner=2)
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