showBioNetNodesLayout: Display Nodes Layout of caOmicsV bioNetCircos Plot

Description Usage Arguments Value Author(s) Examples

Description

Display bioNetCircos layout with empty nodes and edges in order to optimize bioNetCircos layout. An igraph object must be initialized first.

Usage

1
    showBioNetNodesLayout(bgColor=grey(0.75, alpha=0.5))

Arguments

bgColor

character vector for a color name or a R color specification

Value

None

Author(s)

Henry Zhang

Examples

1
2
3
4
5
6
    data(bionetPlotDemoData)
    expr <- bionetPlotDemoData$heatmapData[[1]]
    bioNet <- bc3net(expr)

    initializeBioNetCircos(bioNet, totalSamples=60)
    showBioNetNodesLayout(bgColor=grey(0.75, alpha=0.5))


Search within the caOmicsV package
Search all R packages, documentation and source code

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

Please suggest features or report bugs with the GitHub issue tracker.

All documentation is copyright its authors; we didn't write any of that.