showBioNetNodesLayout: Display Nodes Layout of caOmicsV bioNetCircos Plot
In caOmicsV: Visualization of multi-dimentional cancer genomics data
Description
Usage
Arguments
Value
Author(s)
Examples
View source: R/caOmicsV.bioNetCircos.R
Description
Display bioNetCircos layout with empty nodes and edges in order to
optimize bioNetCircos layout. An igraph object must be initialized first.
Usage
1
showBioNetNodesLayout(bgColor=grey(0.75, alpha=0.5))
Arguments
bgColor
character vector for a color name or a R color specification
Value
None
Author(s)
Henry Zhang
Examples
1
2
3
4
5
6
data(bionetPlotDemoData)
expr <- bionetPlotDemoData$heatmapData[[1]]
bioNet <- bc3net(expr)
initializeBioNetCircos(bioNet, totalSamples=60)
showBioNetNodesLayout(bgColor=grey(0.75, alpha=0.5))
caOmicsV documentation built on Nov. 8, 2020, 8:23 p.m.
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Description Usage Arguments Value Author(s) Examples
View source: R/caOmicsV.bioNetCircos.R
Description
Display bioNetCircos layout with empty nodes and edges in order to optimize bioNetCircos layout. An igraph object must be initialized first.
Usage
1 | showBioNetNodesLayout(bgColor=grey(0.75, alpha=0.5))
|
Arguments
bgColor |
character vector for a color name or a R color specification |
Value
None
Author(s)
Henry Zhang
Examples
1 2 3 4 5 6 | data(bionetPlotDemoData)
expr <- bionetPlotDemoData$heatmapData[[1]]
bioNet <- bc3net(expr)
initializeBioNetCircos(bioNet, totalSamples=60)
showBioNetNodesLayout(bgColor=grey(0.75, alpha=0.5))
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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