setBioNetPlotParameters: Initialize Plot Parameters for caOmicsV bioNetCircos Plot

In caOmicsV: Visualization of multi-dimentional cancer genomics data

Description

Set up plot parameters for bioNetCircos layout including of totalSamples, sampleWidth, nodeRadius, nodePadding, plotAreaWidth, outer and inner boundaries of plotArea, as well as default plot colors. This function is for internal used only.

Usage

    setBioNetPlotParameters(totalSamples, sampleWidth, nodeRadius, 
                    nodePadding, plotAreaWidth)

Arguments

totalSamples	non-negative integer, total number of samples to be plotted
sampleWidth	non-negative integer, number of points of a sample on the circular line
nodeRadius	non-negative numeric, radius of the node
nodePadding	non-negative numeric, padding width in inch between two nodes
plotAreaWidth	non-negative numeric, total width of plot area.

Value

None.

Author(s)

Henry zhang

Examples

    #  Internal used only.

caOmicsV documentation built on Nov. 8, 2020, 8:23 p.m.