Initialize Plot Parameters for caOmicsV bioNetCircos Plot

Description

Set up plot parameters for bioNetCircos layout including of totalSamples, sampleWidth, nodeRadius, nodePadding, plotAreaWidth, outer and inner boundaries of plotArea, as well as default plot colors. This function is for internal used only.

Usage

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    setBioNetPlotParameters(totalSamples, sampleWidth, nodeRadius, 
                    nodePadding, plotAreaWidth)

Arguments

totalSamples

non-negative integer, total number of samples to be plotted

sampleWidth

non-negative integer, number of points of a sample on the circular line

nodeRadius

non-negative numeric, radius of the node

nodePadding

non-negative numeric, padding width in inch between two nodes

plotAreaWidth

non-negative numeric, total width of plot area.

Value

None.

Author(s)

Henry zhang

Examples

1
    #  Internal used only.

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