species: species of cobindR configuration or SeqObj

In cobindR: Finding Co-occuring motifs of transcription factor binding sites

Description

species of cobindR configuration or SeqObj

Usage

## S4 method for signature 'configuration'
species(object)
## S4 replacement method for signature 'configuration'
species(object) <- value
## S4 method for signature 'SeqObj'
species(object)
## S4 replacement method for signature 'SeqObj'
species(object) <- value

Arguments

object	a cobindR configuration object
value	name of species in this experiment or SeqObj

Value

sequence / experiment species (character)

Author(s)

Rob Lehmann <[e-mail]>

See Also

id,experiment_description,sequence_source,sequence_origin,sequence_type,bg_sequence_source,bg_sequence_origin,bg_sequence_type,species,downstream,upstream,max_distance,pairs,pfm_path,threshold,fdrThreshold,path,mart,pValue

Examples

cfg <- cobindRConfiguration()
species(cfg)

cobindR documentation built on April 28, 2020, 6:40 p.m.