accuracy-class: Class "accuracy"

In inveRsion: Inversions in genotype data

Description

These objects hold the accuracy computation for the classification of chromosomes into inverted or non-inverted population for increasing levels of BIC thresholds.

Objects from the Class

accuracy is generated by calls to accBic(inversionList, mem, classFile, nsub, npoints, geno, wROI), which is a method for the class inversionList

Slots

out:

Object of class "matrix"

matrix with three columns storing the range of BIC thresholds, probability of inversion within the population and accuracy of the classification.

Methods

plot

signature(x = "accuracy",w="character"): plots accuracy Vs BIC for w="a", or frequency of inversion Vs BIC for w="f"

Note

version R 2.10.1

Author(s)

Alejandro Caceres [e-mail]

See Also

accBic, inversionList

Examples

data(ac)
ac
plot(ac)

inveRsion documentation built on Nov. 8, 2020, 5:08 p.m.