tableClass: Save HTML or CSV tables of good classifiers (cliques)

In maigesPack: Functions to handle cDNA microarray data, including several methods of data analysis

Description

This function takes an object of class maigesClass resulting from classification analysis and write tables (in HTML or CSV format) a table of the cliques, or classifiers.

Usage

tableClass(classComp=NULL, file="./class_result",
           type=c("HTML","CSV")[1], nCliques=NULL)

Arguments

classComp	object of class maigesClass.
file	character string giving the file name to be saved (without extension).
type	character string with the type of file to be saved. Must be 'HTML' (default) or 'CSV'.
nCliques	integer specifying the number of cliques to be saved. If NULL (default) all cliques in the object are saved.

Value

This function don't return any object.

Author(s)

Gustavo H. Esteves <[e-mail]>

See Also

maigesClass, classifyLDA, classifySVM, classifyKNN, classifyLDAsc, classifySVMsc and classifyKNNsc.

Examples

## Loading the dataset
data(gastro)


## Doing LDA classifier with 3 genes for the 6th gene group comparing
## the 2 categories from 'Type' sample label.
gastro.class = classifyLDA(gastro.summ, sLabelID="Type",
  gNameID="GeneName", nGenes=3, geneGrp=6)

tableClass(gastro.class)

maigesPack documentation built on Nov. 8, 2020, 6:23 p.m.