reducedDimW: Get the whitened expression values for a CellDataSet.

In monocle: Clustering, differential expression, and trajectory analysis for single- cell RNA-Seq

Description

Retrieves the expression values for each cell (as a matrix) after whitening during dimensionality reduction.

Usage

reducedDimW(cds)

Arguments

cds	A CellDataSet object.

Value

A matrix, where each row is a set of whitened expression values for a feature and columns are cells.

Examples

## Not run: 
W <- reducedDimW(HSMM)

## End(Not run)

monocle documentation built on Nov. 8, 2020, 5:06 p.m.