setOrderingFilter: Marks genes for clustering

Description Usage Arguments Value

View source: R/order_cells.R

Description

The function marks genes that will be used for clustering in subsequent calls to clusterCells. The list of selected genes can be altered at any time.

Usage

1
setOrderingFilter(cds, ordering_genes)

Arguments

cds

the CellDataSet upon which to perform this operation

ordering_genes

a vector of feature ids (from the CellDataSet's featureData) used for ordering cells

Value

an updated CellDataSet object


monocle documentation built on April 6, 2018, 2:02 a.m.