Certara.RsNLME
Pharmacometric Modeling

Package index
Search the Certara.RsNLME package
Vignettes
Functions
497
Source code
132
Man pages
136
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Certara.RsNLME: Pharmacometric Modeling
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API

API for Certara.RsNLME
Pharmacometric Modeling

Global functions
.InfVarMap Source code
.add_SimSetupRow Source code
.add_covLabels Source code
.add_engineSetupRow Source code
.add_inputColdefsFromMAP Source code
.add_unitsFixefSecondary Source code
.assignEngineMethod Source code
.assignODEMethod Source code
.check_Auth Source code
.check_CAD_CONFIG_FILE Source code
.check_ColDEFBlock Source code
.check_ColDEFDoses Source code
.check_EmaxArgs Source code
.check_IndirectSequentialArg Source code
.check_Licensed Source code
.check_PKArgs Source code
.check_SSHExecStatusDir Source code
.check_SequentialParams Source code
.check_absorption Source code
.check_column_mappings Source code
.check_data5ID Source code
.check_extradefADDL Source code
.check_extradefSS Source code
.check_linearType Source code
.check_numericText Source code
.check_parameterization Source code
.check_table Source code
.execute_remote Source code
.extract_ResponsesObservations Source code
.extract_mmdlblock Source code
.fill_covarCategories Source code
.find_col_terms Source code
.find_covLabelsPairs Source code
.find_map_pairs Source code
.get_MACAddresses Source code
.get_NamesNlmeSimTableDefPrint Source code
.get_columnsVector Source code
.get_datafromfile Source code
.get_omegaSE_DF Source code
.get_omega_DFs Source code
.get_resultList Source code
.get_slotHostPlatfrom Source code
.get_supportedMethods Source code
.guess_EnvType Source code
.load_engineParams Source code
.load_hostPlatform Source code
.log_Execution Source code
.map_BQL Source code
.map_exactTerms Source code
.map_indirectModels Source code
.modify_s4class Source code
.parse_Fixefs Source code
.paste_hashToScript Source code
.paste_instsharedDirsToScript Source code
.paste_shRlocToScript Source code
.paste_trap Source code
.prepare_NLMEhost Source code
.prepare_datafilepath Source code
.prepare_dotargs Source code
.prepare_sharedDirectory Source code
.prepare_wd Source code
.print_TableDefProperties Source code
.quote_EngineArguments Source code
.remove_comments Source code
.remove_dmptxtParts Source code
.remove_mappedDrive Source code
.remove_oldResults Source code
.report_BackgroundJob Source code
.runCmd_LicensingTool Source code
.splitString Source code
.test_path Source code
.transform_EllipsisToVector Source code
.transform_FixefsStringsToThetas Source code
.update_PMLwithThetas Source code
BootstrapParams Man page
BootstrapParams-class Man page
CovariateEffectModel Man page
CovariateEffectModel-class Man page
DosePoint Man page
DosePoint-class Man page
ExtraDoseDataType Man page
ExtraDoseDataType-class Man page
ExtraDoseItem Man page
ExtraDoseItem-class Man page
GenerateControlfile Source code
GenerateParamsfile Source code
NlmeColumnMap Man page
NlmeColumnMap-class Man page
NlmeColumnMapping Man page
NlmeColumnMapping-class Man page
NlmeCovarItem Man page
NlmeCovarItem-class Man page
NlmeCovariateParameter Man page
NlmeCovariateParameter-class Man page
NlmeDataset Man page
NlmeDataset-class Man page
NlmeDoseMapping Man page
NlmeDoseMapping-class Man page
NlmeEmaxParameters Man page
NlmeEmaxParameters-class Man page
NlmeEngineExtraParams Man page
NlmeEngineExtraParams-class Man page
NlmeErrorModel Man page
NlmeErrorModel-class Man page
NlmeIndirectParameters Man page
NlmeIndirectParameters-class Man page
NlmeJobStatus Man page Source code
NlmeModelAbsorption Man page
NlmeModelAbsorption-class Man page
NlmeModelParameterization Man page
NlmeModelParameterization-class Man page
NlmeModelType Man page
NlmeModelType-class Man page
NlmeObservationVar Man page
NlmeObservationVar-class Man page
NlmeParallelHost Man page
NlmeParallelHost-class Man page
NlmeParallelMethod Man page
NlmeParallelMethod-class Man page
NlmeParamsMapping Man page
NlmeParamsMapping-class Man page
NlmePkParameters Man page
NlmePkParameters-class Man page
NlmePmlModel Man page
NlmePmlModel-class Man page
NlmeRandParamsMapping Man page
NlmeRandParamsMapping-class Man page
NlmeRandomEffectBlock Man page
NlmeRandomEffectValues Man page
NlmeRandomEffectValues-class Man page
NlmeRemoteExecutor Man page
NlmeRemoteExecutor-class Man page
NlmeResidualEffect Man page
NlmeResidualEffect-class Man page
NlmeScenario Man page
NlmeScenario-class Man page
NlmeSimTableDef Man page
NlmeSimTableDef-class Man page
NlmeSimulationParams Man page
NlmeSimulationParams-class Man page
NlmeStrucParamStyle Man page
NlmeStructuralParameter Man page
NlmeStructuralParameter-class Man page
NlmeTableDef Man page
NlmeTableDef-class Man page
NlmeUserAuthentication Man page
NlmeUserAuthentication-class Man page
NlmeVpcParams Man page
NlmeVpcParams-class Man page
OneCpt_IVInfusionData Man page
ProfileParameters Man page
ProfileParameters-class Man page
ProfileVar Man page
ProfileVar-class Man page
ResetColumnInfo Man page
ResetColumnInfo-class Man page
RunProfilePertubation Man page Source code
RunVpcSimulation Source code
SecondaryParameter Man page
SecondaryParameter-class Man page
SortColumns Man page
SortColumns-class Man page
StepwiseParams Man page
StepwiseParams-class Man page
acceptAllEffects Man page Source code
addADDL Man page Source code
addCovariate Man page Source code
addDoseCycle Man page Source code
addExtraDef Man page
addInfusion Man page Source code
addLabel Man page Source code
addMDV Man page Source code
addReset Man page
addReset,NlmePmlModel-method Man page
addSecondary Man page
addSecondary,NlmePmlModel-method Man page
addSteadyState Man page Source code
addTablesToColumnMapping Man page Source code
addToErrorModel Man page Source code
bootstrap Man page Source code
cancelJob Man page
cancelJob,SimpleNlmeJob-method Man page
categoricalCovariate Source code
checkHostParams Man page Source code
checkPKParams Source code
colMapping Man page Source code
continuousCovariate Source code
copyModel Man page Source code
copyTemplateFiles Source code
covariateEffect<- Man page
covariateModel Man page Source code
covariateNames Man page Source code
covariatePartsString Man page Source code
covariateToString Source code
createInitialDoseMapping Source code
createInitialMapping Source code
createInitialParamsMapping Source code
createInitialRandEffectMapping Source code
createModelInfo Man page Source code
create_model_from_metamodel Man page Source code
dataMapping Man page Source code
def Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code
definition Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code Source code
deleteSecondary Man page
deleteSecondary,NlmePmlModel-method Man page
doseNames Man page Source code
downloadFileWithCat Source code
downloadFiles Source code
editColMaps Source code
editModel Man page Source code
emaxmodel Man page Source code
emaxmodel_MappingParameters Man page Source code
engineParams Man page Source code
extraDoseLines Man page Source code
extraDoseNames Man page Source code
extract_mmdl Man page Source code
fitmodel Man page Source code
fixedEffect Man page Source code
fixedParameterNames Source code
generateCovarSearchArgsFile Source code
generatePML Man page
generatePMLModel Man page
generateScenarioArg Source code
getFilesToTransfer Source code
getProfilesString Source code
getRandomEffectNames Man page Source code
getScenarioNames Source code
getThetas Man page Source code
get_extraArgsFile Source code
hostParams Man page Source code
initFixedEffects Man page
initFixedEffects,NlmePmlModel-method Man page
initFixedEffects<- Man page
initFixedEffects<-,NlmePmlModel-method Man page
initializeRandomEffectsBlock Man page
linearmodel Man page Source code
linearmodel_MappingParameters Man page Source code
listCovariateEffectNames Man page
listCovariateEffectNames,NlmePmlModel-method Man page
loadModel Man page Source code
lookupColname Source code
lookupValue Source code
lookupValue2 Source code
map_covariates Source code
map_dosepoints Source code
mkremotedir Source code
modelVariableNames Man page Source code
observationExtraNames Source code
observationNames Man page Source code
obtain_NLMELicense Man page Source code
occasionCovariate Source code
openSession Source code
output_InfoStatus Source code
parseControlFile Source code
parsePMLColMap Man page Source code
parse_NLMEHosts Man page Source code
parse_metamodel Source code
pkData Man page
pkcovbqlData Man page
pkemaxmodel Man page Source code
pkindirectmodel Man page Source code
pkindirectmodel_MappingParameters Man page Source code
pklinearmodel Man page Source code
pkmodel Man page Source code
pkmodel_MappingParameters Man page Source code
pkpdData Man page
print.ExtraDoseDataType Source code
print.ExtraDoseItem Source code
print.ExtraDoseOption Source code
print.NlmeColumnMap Source code
print.NlmeCovariateParameter Source code
print.NlmeEngineExtraParams Man page Source code
print.NlmeErrorModel Source code
print.NlmeParallelHost Man page Source code
print.NlmePmlModel Man page Source code
print.NlmeSimTableDef Source code
print.NlmeStructuralParameter Source code
print.NlmeTableDef Source code
print.NlmeUserAuthentication Source code
print.SecondaryParameter Source code
print.SimpleNlmeJob Man page Source code
print.simParamsBlock Source code
print_EmaxAttributes Source code
print_IndirectAttributes Source code
print_LinearAttributes Source code
print_PKattributes Source code
profilePertubate Man page Source code
randParameterNames Source code
randomBlockStatement Man page
randomEffect Man page Source code
randomOccasionalBlockStatement Man page
readInitialEstimatesParams Source code
removeCommandFile Source code
removeCovariate Man page
remove_NLMELicense Man page Source code
residualEffect<- Man page
residualEffectNames Man page Source code
residualError Man page Source code
retrieveJobResults Source code
run_metamodel Man page Source code
saveModel Man page Source code
saveUpdatedMetamodel Man page Source code
secondaryParameterNames Man page Source code
set_Xchmod Source code
shotgunSearch Man page Source code
simmodel Man page Source code
sortfit Man page Source code
stepwiseSearch Man page Source code
structuralParam<- Man page
structuralParameter Man page Source code
structuralParameterNames Man page Source code
tableParams Man page Source code
textualmodel Man page Source code
updateErrorModel Man page
updateFixedEffectStr Source code
updateValue Source code
updateValue2 Source code
uploadFiles Source code
vpcmodel Man page Source code
waitForJobToFinish Source code
writeColumnMapping Source code
writeDefaultFiles Man page Source code
writeDoseMapping Source code
writeInputData Source code
writeModelStatements Source code
writeParamsMapping Source code
writeRandParamsMapping Source code
Certara.RsNLME documentation built on April 3, 2025, 11:04 p.m.

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