tests/testthat/test_ReadStrelkaSBSVCF.R

context("ReadStrelkaSBSVCF")

test_that('Read in VCF with column that has name "strand" or "VAF"', {
  expect_warning(ReadStrelkaSBSVCF("testdata/Strelka.colname.strand.vcf"))
  expect_warning(ReadStrelkaSBSVCF("testdata/Strelka.colname.VAF.vcf"))
})

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ICAMS documentation built on April 3, 2021, 5:07 p.m.