inst/shinyapp/helper/get_batch_data.md

In UCSCXenaShiny: Interactive Analysis of UCSC Xena Data

• In this step, you can query multiple identifiers of tumor data under one specific "Data type"--"Data subtype;
• Generally, the following 3 way can be performed to select batch IDs;

1. In the "Selection" way, choose multiple IDs one by one;
2. In the "All" way, directly choose all IDs under the data subtype. For molecular profile, you need further choose one pathway to limit the ID size;
3. In the "File" way, choose IDs by uploading an one-column file. You can download the example data to check the format requirements.

• See more details in UCSCXenaShiny v2 book.

UCSCXenaShiny documentation built on Aug. 8, 2025, 7:19 p.m.