biogram: N-Gram Analysis of Biological Sequences

Tools for extraction and analysis of various n-grams (k-mers) derived from biological sequences (proteins or nucleic acids). Contains QuiPT (quick permutation test) for fast feature-filtering of the n-gram data.

Package details

AuthorMichal Burdukiewicz [cre, aut], Piotr Sobczyk [aut], Chris Lauber [aut]
MaintainerMichal Burdukiewicz <[email protected]>
LicenseGPL-3
Version1.4
URL https://github.com/michbur/biogram
Package repositoryView on CRAN
Installation Install the latest version of this package by entering the following in R:
install.packages("biogram")

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biogram documentation built on May 2, 2019, 2:50 p.m.