human_cleave: Human signal peptides cleavage sites

Description Format Details Note Source Examples

Description

A set of 648 cleavage sites and 648 parts of mature proteins shortly after cleavage sites derived from human proteome.

Format

A data frame with 1296 observations on the following 10 variables. Columns from P1 to P9 describes positions in an extracted peptide. tar is a target vector. It has value 1 if a peptide is a cleavage site and 0 if not.

Details

Each peptide in the data set is nine amino acid residues long. In case of cleavage sites, the clevage is located between fifth and sixth peptide. The non-cleavage sites are parts of mature proteins starting five positions after cleavage site.

Note

Amino acid residues were recoded as integers.

Source

UniProt

Examples

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biogram documentation built on March 31, 2020, 5:14 p.m.