n2l: Convert numbers to letters

In biogram: N-Gram Analysis of Biological Sequences

Description

Converts biological sequence from number to letter notation.

Usage

n2l(seq, seq_type)

Arguments

seq	integer vector or matrix representing single sequence.
seq_type	the type of sequence. Can be rna, dna or prot.

Value

a character vector or matrix containing converted elements.

See Also

n2l is a wrapper around degenerate.

Inverse function: l2n.

Examples

sample_seq <- c(1, 3, 3, 6, 1, 6, 12, 1, 10)
n2l(sample_seq, "prot")

biogram documentation built on March 31, 2020, 5:14 p.m.