getPalette: Get a color palette for a predefined set of trait values....
In dowser: B Cell Receptor Phylogenetics Toolkit

View source: R/Plotting.R

getPalette

R Documentation

Get a color palette for a predefined set of trait values. 'Germline' defaults to black unless specified.

Description

getPalette Gets a color palette for a predefined set of trait values

Usage

getPalette(states, palette)

Arguments

`states`	states in model
`palette`	The colorbrewer palette to use

Value

A named vector with each state corresponding to a color

See Also

getTrees, plotTrees

dowser documentation built on Nov. 5, 2025, 6:36 p.m.

dowser index

Package overview README.md Building trees with paired heavy and light chain data Build Lineage Trees Build Time Trees Using TyCHE and BEAST Discrete Trait Analysis Measurable evolution Plotting Lineage Trees Quickstart Reconstruct Clonal Germlines Reconstruct Intermediate Sequences Build B cell lineage trees Building trees with paired heavy and light chain data Build Time Trees Using TyCHE and BEAST Detect ongoing B cell evolution Discrete trait analysis Dowser: Simple lineage tree construction Plot B cell lineage trees Reconstruct clonal germline sequences Reconstruct intermediate sequences Using data from non-B cells

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